Merge branch 'master' of github.com:lana-k/sqliteviz

* Build SQLite 3.41.0

* Update pivot_vtab

* Add Pearson correlation coefficient function extension, build

* Add an easy way to running test locally without Nodejs

* Use RSS sum to pick top2 processes for the report

* Try previous Ubuntu LTS as a workaround for Firefox worker not starting

.github/workflows/test.yml

@@ -11,7 +11,7 @@ on:
 jobs:
   test:
     name: Run tests
-    runs-on: ubuntu-latest    
+    runs-on: ubuntu-20.04
     steps:
     - uses: actions/checkout@v2
     - name: Use Node.js

Dockerfile.test

@@ -0,0 +1,24 @@
+# An easy way to run tests locally without Nodejs installed:
+#
+#     docker build -t sqliteviz/test -f Dockerfile.test .
+#
+
+FROM node:12
+
+RUN set -ex; \
+    apt update; \
+    apt install -y chromium firefox-esr; \
+    npm install -g npm@7
+
+WORKDIR /tmp/build
+
+COPY package.json package-lock.json ./
+COPY lib lib
+RUN npm install
+
+COPY . .
+
+RUN set -ex; \
+    sed -i 's/browsers: \[.*\],/browsers: ['"'FirefoxHeadlessTouch'"'],/' karma.conf.js
+
+RUN npm run lint -- --no-fix && npm run test

lib/sql-js/Dockerfile

@@ -1,4 +1,4 @@
-FROM emscripten/emsdk:2.0.24
+FROM emscripten/emsdk:3.0.1
 
 WORKDIR /tmp/build
 

lib/sql-js/README.md

@@ -43,6 +43,8 @@ SQLite [miscellaneous extensions][3] included:
 SQLite 3rd party extensions included:
 
 1. [pivot_vtab][5] -- a pivot virtual table
+2. `pearson` correlation coefficient function extension from [sqlean][21]
+   (which is part of [squib][20])
 
 To ease the step to have working clone locally, the build is committed into
 the repository.
@@ -99,3 +101,5 @@ described in [this message from SQLite Forum][12]:
 [17]: https://sqlite.org/contrib/
 [18]: https://sqlite.org/contrib//download/extension-functions.c?get=25
 [19]: https://github.com/lana-k/sqliteviz/blob/master/tests/lib/database/sqliteExtensions.spec.js
+[20]: https://github.com/mrwilson/squib/blob/master/pearson.c
+[21]: https://github.com/nalgeon/sqlean/blob/incubator/src/pearson.c

lib/sql-js/benchmark/README.md

@@ -1,14 +1,25 @@
 # SQLite WebAssembly build micro-benchmark
 
-This directory contains a micro-benchmark for evaluating SQLite
-WebAssembly builds performance on typical SQL queries, run from
-`make.sh` script. It can also serve as a smoke test.
+This directory contains a micro-benchmark for evaluating SQLite WebAssembly
+builds performance on read and write SQL queries, run from `make.sh` script. If
+the script has permission to `nice` processes and [Procpath][1] is installed,
+e.g. it is run with `sudo -E env PATH=$PATH ./make.sh`, it'll `renice` all
+processes running inside the benchmark containers. It can also serve as a smoke
+test (e.g. for memory leaks).
 
-The benchmark operates on a set of SQLite WebAssembly builds expected
-in `lib/build-$NAME` directories each containing `sql-wasm.js` and
-`sql-wasm.wasm`. Then it creates a Docker image for each, and runs
-the benchmark in Firefox and Chromium using Karma in the container.
+The benchmark operates on a set of SQLite WebAssembly builds expected in
+`lib/build-$NAME` directories each containing `sql-wasm.js` and
+`sql-wasm.wasm`. Then it creates a Docker image for each, and runs the
+benchmark in Firefox and Chromium using Karma in the container.
 
-After successful run, the benchmark result of each build is contained
-in `build-$NAME-result.json`. The JSON result files can be analysed
-using `result-analysis.ipynb` Jupyter notebook.
+After successful run, the benchmark produces the following per each build:
+
+- `build-$NAME-result.json`
+- `build-$NAME.sqlite` (if Procpath is installed)
+- `build-$NAME.svg` (if Procpath is installed)
+
+These files can be analysed using `result-analysis.ipynb` Jupyter notebook.
+The SVG is a chart with CPU and RSS usage of each test container (i.e. Chromium
+run, then Firefox run per container).
+
+[1]: https://pypi.org/project/Procpath/

lib/sql-js/benchmark/make.sh

@@ -1,7 +1,8 @@
 #!/bin/bash -e
 
 cleanup () {
-  rm -rf lib/dist $flag_file
+  rm -rf lib/dist "$renice_flag_file"
+  docker rm -f sqljs-benchmark-run 2> /dev/null || true
 }
 trap cleanup EXIT
 
@@ -11,34 +12,36 @@ if [ ! -f sample.csv ]; then
     | gunzip -c > sample.csv
 fi
 
+PLAYBOOK=procpath/karma_docker.procpath
+
 # for renice to work run like "sudo -E env PATH=$PATH ./make.sh"
-test_ni=$(nice -n -1 nice)
-if [ $test_ni == -1 ]; then
-  flag_file=$(mktemp)
+test_ni=$(nice -n -5 nice)
+if [ $test_ni == -5 ]; then
+  renice_flag_file=$(mktemp)
 fi
-(
-  while [ -f $flag_file ]; do
-    root_pid=$(
-      docker ps -f status=running -f name='^sqljs-benchmark-' -q \
-        | xargs -r -I{} -- docker inspect -f '{{.State.Pid}}' {}
-    )
-    if [ ! -z $root_pid ]; then
-      procpath query -d $'\n' "$..children[?(@.stat.pid == $root_pid)]..pid" \
-        | xargs -I{} -- renice -n -1 -p {} > /dev/null
-    fi
-    sleep 1
-  done &
-)
+{
+  while [ -f $renice_flag_file ]; do
+    procpath --logging-level ERROR play -f $PLAYBOOK renice:watch
+  done
+} &
 
 shopt -s nullglob
 for d in lib/build-* ; do
   rm -rf lib/dist
   cp -r $d lib/dist
+  sample_name=$(basename $d)
 
-  name=$(basename $d)
-  docker build -t sqliteviz/sqljs-benchmark:$name .
-  docker rm sqljs-benchmark-$name 2> /dev/null || true
-  docker run -it --cpus 2 --name sqljs-benchmark-$name sqliteviz/sqljs-benchmark:$name
-  docker cp sqljs-benchmark-$name:/tmp/build/suite-result.json ${name}-result.json
-  docker rm sqljs-benchmark-$name
+  docker build -t sqliteviz/sqljs-benchmark .
+  docker rm sqljs-benchmark-run 2> /dev/null || true
+  docker run -d -it --cpus 2 --name sqljs-benchmark-run sqliteviz/sqljs-benchmark
+  {
+    rm -f ${sample_name}.sqlite
+    procpath play -f $PLAYBOOK -o database_file=${sample_name}.sqlite track:record
+    procpath play -f $PLAYBOOK -o database_file=${sample_name}.sqlite \
+      -o plot_file=${sample_name}.svg track:plot
+  } &
+
+  docker attach sqljs-benchmark-run
+  docker cp sqljs-benchmark-run:/tmp/build/suite-result.json ${sample_name}-result.json
+  docker rm sqljs-benchmark-run
 done

lib/sql-js/benchmark/procpath/karma_docker.procpath

@@ -0,0 +1,28 @@
+# This command may run when "sqljs-benchmark-run" does not yet exist or run
+[renice:watch]
+interval: 2
+repeat: 30
+environment:
+  ROOT_PID=docker inspect -f "{{.State.Pid}}" sqljs-benchmark-run 2> /dev/null || true
+query:
+  PIDS=$..children[?(@.stat.pid in [$ROOT_PID])]..pid
+command:
+  echo $PIDS | tr , '\n' | xargs --no-run-if-empty -I{} -- renice -n -5 -p {}
+
+# Expected input arguments: database_file
+[track:record]
+interval: 1
+stop_without_result: 1
+environment:
+  ROOT_PID=docker inspect -f "{{.State.Pid}}" sqljs-benchmark-run
+query:
+  $..children[?(@.stat.pid == $ROOT_PID)]
+pid_list: $ROOT_PID
+
+# Expected input arguments: database_file, plot_file
+[track:plot]
+moving_average_window: 5
+title: Chromium vs Firefox (№1 RSS, №2 CPU)
+custom_query_file:
+  procpath/top2_rss.sql
+  procpath/top2_cpu.sql

lib/sql-js/benchmark/procpath/top2_cpu.sql

@@ -0,0 +1,29 @@
+WITH diff_all AS (
+    SELECT
+        record_id,
+        ts,
+        stat_pid,
+        stat_utime + stat_stime - LAG(stat_utime + stat_stime) OVER (
+            PARTITION BY stat_pid
+            ORDER BY record_id
+        ) tick_diff,
+        ts - LAG(ts) OVER (
+            PARTITION BY stat_pid
+            ORDER BY record_id
+        ) ts_diff
+    FROM record
+), diff AS (
+    SELECT * FROM diff_all WHERE tick_diff IS NOT NULL
+), one_time_pid_condition AS (
+    SELECT stat_pid
+    FROM record
+    GROUP BY 1
+    ORDER BY SUM(stat_utime + stat_stime) DESC
+    LIMIT 2
+)
+SELECT
+    ts,
+    stat_pid pid,
+    100.0 * tick_diff / (SELECT value FROM meta WHERE key = 'clock_ticks') / ts_diff value
+FROM diff
+JOIN one_time_pid_condition USING(stat_pid)

lib/sql-js/benchmark/procpath/top2_rss.sql

@@ -0,0 +1,13 @@
+WITH one_time_pid_condition AS (
+    SELECT stat_pid
+    FROM record
+    GROUP BY 1
+    ORDER BY SUM(stat_rss) DESC
+    LIMIT 2
+)
+SELECT
+    ts,
+    stat_pid pid,
+    stat_rss / 1024.0 / 1024 * (SELECT value FROM meta WHERE key = 'page_size') value
+FROM record
+JOIN one_time_pid_condition USING(stat_pid)

lib/sql-js/build.py

@@ -2,9 +2,11 @@ import logging
 import subprocess
 from pathlib import Path
 
-
+# See the setting descriptions on these pages:
+# - https://emscripten.org/docs/optimizing/Optimizing-Code.html
+# - https://github.com/emscripten-core/emscripten/blob/main/src/settings.js
 cflags = (
-    '-O2',
+    # SQLite configuration
     '-DSQLITE_DEFAULT_CACHE_SIZE=-65536',  # 64 MiB
     '-DSQLITE_DEFAULT_MEMSTATUS=0',
     '-DSQLITE_DEFAULT_SYNCHRONOUS=0',
@@ -13,26 +15,26 @@ cflags = (
     '-DSQLITE_ENABLE_FTS3',
     '-DSQLITE_ENABLE_FTS3_PARENTHESIS',
     '-DSQLITE_ENABLE_FTS5',
-    '-DSQLITE_ENABLE_JSON1',
     '-DSQLITE_ENABLE_NORMALIZE',
     '-DSQLITE_EXTRA_INIT=extra_init',
     '-DSQLITE_OMIT_DEPRECATED',
     '-DSQLITE_OMIT_LOAD_EXTENSION',
     '-DSQLITE_OMIT_SHARED_CACHE',
     '-DSQLITE_THREADSAFE=0',
+    # Compile-time optimisation
+    '-Os',  # reduces the code size about in half comparing to -O2
+    '-flto',
 )
 emflags = (
     # Base
     '--memory-init-file', '0',
-    '-s', 'RESERVED_FUNCTION_POINTERS=64',
     '-s', 'ALLOW_TABLE_GROWTH=1',
-    '-s', 'SINGLE_FILE=0',
     # WASM
     '-s', 'WASM=1',
     '-s', 'ALLOW_MEMORY_GROWTH=1',
-    # Optimisation
-    '-s', 'INLINING_LIMIT=50',
-    '-O3',
+    '-s', 'ENVIRONMENT=web,worker',
+    # Link-time optimisation
+    '-Os',
     '-flto',
     # sql.js
     '-s', 'EXPORTED_FUNCTIONS=@src/sqljs/exported_functions.json',
@@ -50,22 +52,22 @@ def build(src: Path, dst: Path):
         'emcc',
         *cflags,
         '-c', src / 'sqlite3.c',
-        '-o', out / 'sqlite3.bc',
+        '-o', out / 'sqlite3.o',
     ])
     logging.info('Building LLVM bitcode for extension-functions.c')
     subprocess.check_call([
         'emcc',
         *cflags,
         '-c', src / 'extension-functions.c',
-        '-o', out / 'extension-functions.bc',
+        '-o', out / 'extension-functions.o',
     ])
 
     logging.info('Building WASM from bitcode')
     subprocess.check_call([
         'emcc',
         *emflags,
-        out / 'sqlite3.bc',
-        out / 'extension-functions.bc',
+        out / 'sqlite3.o',
+        out / 'extension-functions.o',
         '-o', out / 'sql-wasm.js',
     ])
 

lib/sql-js/configure.py

@@ -8,7 +8,7 @@ from pathlib import Path
 from urllib import request
 
 
-amalgamation_url = 'https://sqlite.org/2022/sqlite-amalgamation-3390000.zip'
+amalgamation_url = 'https://sqlite.org/2023/sqlite-amalgamation-3410000.zip'
 
 # Extension-functions
 # ===================
@@ -28,10 +28,11 @@ extension_urls = (
     ('https://sqlite.org/src/raw/09f967dc?at=decimal.c', 'sqlite3_decimal_init'),
     # Third-party extension
     # =====================
-    ('https://github.com/jakethaw/pivot_vtab/raw/08ab0797/pivot_vtab.c', 'sqlite3_pivotvtab_init'),
+    ('https://github.com/jakethaw/pivot_vtab/raw/9323ef93/pivot_vtab.c', 'sqlite3_pivotvtab_init'),
+    ('https://github.com/nalgeon/sqlean/raw/95e8d21a/src/pearson.c', 'sqlite3_pearson_init'),
 )
 
-sqljs_url = 'https://github.com/sql-js/sql.js/archive/refs/tags/v1.5.0.zip'
+sqljs_url = 'https://github.com/sql-js/sql.js/archive/refs/tags/v1.7.0.zip'
 
 
 def _generate_extra_init_c_function(init_function_names):

package-lock.json

@@ -1,12 +1,12 @@
 {
   "name": "sqliteviz",
-  "version": "0.18.1",
+  "version": "0.22.0",
   "lockfileVersion": 2,
   "requires": true,
   "packages": {
     "": {
       "name": "sqliteviz",
-      "version": "0.18.1",
+      "version": "0.22.0",
       "license": "Apache-2.0",
       "dependencies": {
         "codemirror": "^5.57.0",
@@ -5248,9 +5248,9 @@
       "dev": true
     },
     "node_modules/caniuse-lite": {
-      "version": "1.0.30001352",
-      "resolved": "https://registry.npmjs.org/caniuse-lite/-/caniuse-lite-1.0.30001352.tgz",
-      "integrity": "sha512-GUgH8w6YergqPQDGWhJGt8GDRnY0L/iJVQcU3eJ46GYf52R8tk0Wxp0PymuFVZboJYXGiCqwozAYZNRjVj6IcA==",
+      "version": "1.0.30001488",
+      "resolved": "https://registry.npmjs.org/caniuse-lite/-/caniuse-lite-1.0.30001488.tgz",
+      "integrity": "sha512-NORIQuuL4xGpIy6iCCQGN4iFjlBXtfKWIenlUuyZJumLRIindLb7wXM+GO8erEhb7vXfcnf4BAg2PrSDN5TNLQ==",
       "dev": true,
       "funding": [
         {
@@ -5260,6 +5260,10 @@
         {
           "type": "tidelift",
           "url": "https://tidelift.com/funding/github/npm/caniuse-lite"
+        },
+        {
+          "type": "github",
+          "url": "https://github.com/sponsors/ai"
         }
       ]
     },
@@ -27489,7 +27493,6 @@
       "integrity": "sha512-iFv9J3F5VKUPcbx+TqW5qhGmAVyXQxPRpKpPOuTLFIVTzg+iwJnrqVbL4kJU5ECGDxPESW2oCVgxv9bTlDPu7w==",
       "dev": true,
       "requires": {
-        "@babel/core": "^7.11.0",
         "@babel/helper-compilation-targets": "^7.9.6",
         "@babel/helper-module-imports": "^7.8.3",
         "@babel/plugin-proposal-class-properties": "^7.8.3",
@@ -27502,7 +27505,6 @@
         "@vue/babel-plugin-jsx": "^1.0.3",
         "@vue/babel-preset-jsx": "^1.2.4",
         "babel-plugin-dynamic-import-node": "^2.3.3",
-        "core-js": "^3.6.5",
         "core-js-compat": "^3.6.5",
         "semver": "^6.1.0"
       }
@@ -29627,9 +29629,9 @@
       "dev": true
     },
     "caniuse-lite": {
-      "version": "1.0.30001352",
-      "resolved": "https://registry.npmjs.org/caniuse-lite/-/caniuse-lite-1.0.30001352.tgz",
-      "integrity": "sha512-GUgH8w6YergqPQDGWhJGt8GDRnY0L/iJVQcU3eJ46GYf52R8tk0Wxp0PymuFVZboJYXGiCqwozAYZNRjVj6IcA==",
+      "version": "1.0.30001488",
+      "resolved": "https://registry.npmjs.org/caniuse-lite/-/caniuse-lite-1.0.30001488.tgz",
+      "integrity": "sha512-NORIQuuL4xGpIy6iCCQGN4iFjlBXtfKWIenlUuyZJumLRIindLb7wXM+GO8erEhb7vXfcnf4BAg2PrSDN5TNLQ==",
       "dev": true
     },
     "canvas-fit": {

package.json

@@ -1,6 +1,6 @@
 {
   "name": "sqliteviz",
-  "version": "0.21.1",
+  "version": "0.22.0",
   "license": "Apache-2.0",
   "private": true,
   "scripts": {

src/store/mutations.js

@@ -53,5 +53,11 @@ export default {
   },
   updatePredefinedInquiries (state, inquiries) {
     state.predefinedInquiries = Array.isArray(inquiries) ? inquiries : [inquiries]
+  },
+  setLoadingPredefinedInquiries (state, value) {
+    state.loadingPredefinedInquiries = value
+  },
+  setPredefinedInquiriesLoaded (state, value) {
+    state.predefinedInquiriesLoaded = value
   }
 }

src/store/state.js

@@ -4,5 +4,7 @@ export default {
   currentTabId: null,
   untitledLastIndex: 0,
   predefinedInquiries: [],
+  loadingPredefinedInquiries: false,
+  predefinedInquiriesLoaded: false,
   db: null
 }

src/views/Main/Inquiries/index.vue

@@ -1,11 +1,18 @@
 <template>
-  <div>
+  <div id="my-inquiries-container">
     <div id="start-guide" v-if="allInquiries.length === 0">
       You don't have saved inquiries so far.
       <span class="link" @click="$root.$emit('createNewInquiry')">Create</span>
       the one from scratch or
       <span @click="importInquiries" class="link">import</span> from a file.
     </div>
+    <div
+      id="loading-predefined-status"
+      v-if="$store.state.loadingPredefinedInquiries"
+    >
+      <loading-indicator/>
+      Loading predefined inquiries...
+    </div>
     <div id="my-inquiries-content" ref="my-inquiries-content" v-show="allInquiries.length > 0">
       <div id="my-inquiries-toolbar">
         <div id="toolbar-buttons">
@@ -157,6 +164,7 @@ import DeleteIcon from './svg/delete'
 import CloseIcon from '@/components/svg/close'
 import TextField from '@/components/TextField'
 import CheckBox from '@/components/CheckBox'
+import LoadingIndicator from '@/components/LoadingIndicator'
 import tooltipMixin from '@/tooltipMixin'
 import storedInquiries from '@/lib/storedInquiries'
 
@@ -169,7 +177,8 @@ export default {
     DeleteIcon,
     CloseIcon,
     TextField,
-    CheckBox
+    CheckBox,
+    LoadingIndicator
   },
   mixins: [tooltipMixin],
   data () {
@@ -248,15 +257,21 @@ export default {
       }
     }
   },
-  created () {
-    storedInquiries.readPredefinedInquiries()
-      .then(inquiries => {
+  async created () {
+    this.inquiries = storedInquiries.getStoredInquiries()
+    const loadingPredefinedInquiries = this.$store.state.loadingPredefinedInquiries
+    const predefinedInquiriesLoaded = this.$store.state.predefinedInquiriesLoaded
+    if (!predefinedInquiriesLoaded && !loadingPredefinedInquiries) {
+      try {
+        this.$store.commit('setLoadingPredefinedInquiries', true)
+        const inquiries = await storedInquiries.readPredefinedInquiries()
         this.$store.commit('updatePredefinedInquiries', inquiries)
-      })
-      .catch(console.error)
-      .finally(() => {
-        this.inquiries = storedInquiries.getStoredInquiries()
-      })
+        this.$store.commit('setPredefinedInquiriesLoaded', true)
+      } catch (e) {
+        console.error(e)
+      }
+      this.$store.commit('setLoadingPredefinedInquiries', false)
+    }
   },
   mounted () {
     this.resizeObserver = new ResizeObserver(this.calcMaxTableHeight)
@@ -441,6 +456,21 @@ export default {
 </script>
 
 <style scoped>
+#my-inquiries-container {
+  position: relative;
+}
+
+#loading-predefined-status {
+  position: absolute;
+  right: 0;
+  display: flex;
+  gap: 4px;
+  font-size: 12px;
+  color: var(--color-text-light-2);
+  align-items: center;
+  padding: 8px;
+}
+
 #start-guide {
   position: absolute;
   top: 50%;

src/views/Main/Workspace/Tabs/Tab/DataView/Chart/index.vue

@@ -66,7 +66,8 @@ export default {
       notifyOnLogging: 1
     })
     this.$watch(
-      () => this.state.data.map(trace => `${trace.type}-${trace.mode}`)
+      () => this.state && this.state.data && this.state.data
+        .map(trace => `${trace.type}${trace.mode ? '-' + trace.mode : ''}`)
         .join(','),
       (value) => {
         events.send('viz_plotly.render', null, {

tests/lib/database/sqliteExtensions.spec.js

@@ -160,39 +160,39 @@ describe('SQLite extensions', function () {
   it('supports transitive_closure', async function () {
     const actual = await db.execute(`
       CREATE TABLE node(
-      node_id   INTEGER NOT NULL PRIMARY KEY,
-      parent_id INTEGER,
-      name      VARCHAR(127),
-      FOREIGN KEY (parent_id) REFERENCES node(node_id)
-    );
-    CREATE INDEX node_parent_id_idx ON node(parent_id);
-
-    CREATE VIRTUAL TABLE node_closure USING transitive_closure(
-        tablename    = "node",
-        idcolumn     = "node_id",
-        parentcolumn = "parent_id"
+        node_id   INTEGER NOT NULL PRIMARY KEY,
+        parent_id INTEGER,
+        name      VARCHAR(127),
+        FOREIGN KEY (parent_id) REFERENCES node(node_id)
       );
+      CREATE INDEX node_parent_id_idx ON node(parent_id);
 
-    INSERT INTO node VALUES
-      (1,  NULL, 'tests'),
-      (2,  1,    'lib'),
-      (3,  2,    'database'),
-      (4,  2,    'utils'),
-      (5,  2,    'storedQueries.spec.js'),
-      (6,  3,    '_sql.spec.js'),
-      (7,  3,    '_statements.spec.js'),
-      (8,  3,    'database.spec.js'),
-      (9,  3,    'sqliteExtensions.spec.js'),
-      (10, 4,    'fileIo.spec.js'),
-      (11, 4,    'time.spec.js');
+      CREATE VIRTUAL TABLE node_closure USING transitive_closure(
+          tablename    = "node",
+          idcolumn     = "node_id",
+          parentcolumn = "parent_id"
+        );
 
-      SELECT name
-      FROM node
-      WHERE node_id IN (
-        SELECT nc.id
-        FROM node_closure AS nc
-        WHERE nc.root = 2 AND nc.depth = 2
-      );
+      INSERT INTO node VALUES
+        (1,  NULL, 'tests'),
+        (2,  1,    'lib'),
+        (3,  2,    'database'),
+        (4,  2,    'utils'),
+        (5,  2,    'storedQueries.spec.js'),
+        (6,  3,    '_sql.spec.js'),
+        (7,  3,    '_statements.spec.js'),
+        (8,  3,    'database.spec.js'),
+        (9,  3,    'sqliteExtensions.spec.js'),
+        (10, 4,    'fileIo.spec.js'),
+        (11, 4,    'time.spec.js');
+
+        SELECT name
+        FROM node
+        WHERE node_id IN (
+          SELECT nc.id
+          FROM node_closure AS nc
+          WHERE nc.root = 2 AND nc.depth = 2
+        );
     `)
     expect(actual.values).to.eql({
       name: [
@@ -293,7 +293,7 @@ describe('SQLite extensions', function () {
 
   it('supports decimal', async function () {
     const actual = await db.execute(`
-      select
+      SELECT
         decimal_add(decimal('0.1'), decimal('0.2')) "add",
         decimal_sub(0.2, 0.1) sub,
         decimal_mul(power(2, 69), 2) mul,
@@ -430,4 +430,29 @@ describe('SQLite extensions', function () {
       ]
     })
   })
+
+  it('supports pearson', async function () {
+    const actual = await db.execute(`
+      CREATE TABLE dataset(x REAL, y REAL, z REAL);
+      INSERT INTO dataset VALUES
+        (5,3,3.2),  (5,6,4.3),  (5,9,5.4),
+        (10,3,4),   (10,6,3.8), (10,9,3.6),
+        (15,3,4.8), (15,6,4),   (15,9,3.5);
+
+      SELECT
+        pearson(x, x) xx,
+        pearson(x, y) xy,
+        abs(-0.12666 - pearson(x, z)) < 0.00001 xz,
+        pearson(y, x) yx,
+        pearson(y, y) yy,
+        abs(0.10555 - pearson(y, z))  < 0.00001 yz,
+        abs(-0.12666 - pearson(z, x)) < 0.00001 zx,
+        abs(0.10555 - pearson(z, y))  < 0.00001 zy,
+        pearson(z, z) zz
+      FROM dataset;
+    `)
+    expect(actual.values).to.eql({
+      xx: [1], xy: [0], xz: [1], yx: [0], yy: [1], yz: [1], zx: [1], zy: [1], zz: [1]
+    })
+  })
 })

tests/store/mutations.spec.js

@@ -7,7 +7,9 @@ const {
   setCurrentTabId,
   setCurrentTab,
   updatePredefinedInquiries,
-  setDb
+  setDb,
+  setLoadingPredefinedInquiries,
+  setPredefinedInquiriesLoaded
 } = mutations
 
 describe('mutations', () => {
@@ -377,4 +379,22 @@ describe('mutations', () => {
     updatePredefinedInquiries(state, inquiries)
     expect(state.predefinedInquiries).to.eql(inquiries)
   })
+
+  it('setLoadingPredefinedInquiries', () => {
+    const state = {
+      loadingPredefinedInquiries: false
+    }
+
+    setLoadingPredefinedInquiries(state, true)
+    expect(state.loadingPredefinedInquiries).to.equal(true)
+  })
+
+  it('setPredefinedInquiriesLoaded', () => {
+    const state = {
+      predefinedInquiriesLoaded: false
+    }
+
+    setPredefinedInquiriesLoaded(state, true)
+    expect(state.predefinedInquiriesLoaded).to.equal(true)
+  })
 })