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Graph.md
123
Graph.md
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# Graph
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# Graph
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Sqliteviz supports graph (network) visualisation. To build a graph, first run a query to get data.
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Sqliteviz supports graph (network) visualisation. To build a graph, first run a query to get data.
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Then open the visualisation panel by clicking 
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Then open the visualisation panel by clicking 
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in any of the two-side toolbars and choose the graph mode by clicking .
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in any of the two-side toolbars and choose the graph mode by clicking .
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@@ -9,16 +9,16 @@ in any of the two-side toolbars and choose the graph mode by clicking 
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- the first column must contain JSON documents (subsequent columns in the result set are ignored)
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- each JSON document has a key indicating whether the document represents a node/vertex (value `0`)
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- each JSON document has a key indicating whether the document represents a node/vertex (value `0`)
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or an edge (value `1`)
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or an edge (value `1`)
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- each JSON document representing a node has a key with the node/vertex id
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- each JSON document representing a node has a key with the node/vertex id
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- each JSON document representing an edge has a key with the edge source node/vertex and a key with
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- each JSON document representing an edge has a key with the edge source node/vertex and a key with
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the edge target node/vertex
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the edge target node/vertex
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That is what is the minimum required for a graph, but the JSON documents can have more fields used
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That is what is the minimum required for a graph, but the JSON documents can have more fields used
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in graph styling (read [Graph styling](#graph-styling)).
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in graph styling (read [Graph styling](#graph-styling)).
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See also an example in [How to get result set suitable for graph visualisation][1].
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See also an example in [How to get a result set suitable for graph visualisation][1].
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## Graph structure
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## Graph structure
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@@ -49,29 +49,29 @@ There are the following settings in `Style` > `Nodes` panel:
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- Label Color - a color of node labels
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- Label Color - a color of node labels
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- Size - set a node size. There are 3 modes of node sizing: constant, variable and calculated.
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- Size - set a node size. There are 3 modes of node sizing: constant, variable and calculated.
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* `Constant` means that all nodes have the same given size.
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- `Constant` means that all nodes have the same given size.
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* `Variable` allows you to choose a field where the node size is taken from.
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- `Variable` allows you to choose a field where the node size is taken from.
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* `Calculated` allows you to choose a method that is used to calculate the node size.
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- `Calculated` allows you to choose a method that is used to calculate the node size.
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Currently, 3 methods are available: total node degree, degree by in-edges and
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Currently, 3 methods are available: total node degree, degree by in-edges and
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degree by out-edges.
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degree by out-edges.
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For variable and calculated sizing it's also possible to set the scale, the minimum
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For variable and calculated sizing it's also possible to set the scale, the minimum
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size and the sizing mode - area or diameter. In the diameter mode the difference
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size and the sizing mode - area or diameter. In the diameter mode the difference
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between node sizes is more noticeable.
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between node sizes is more noticeable.
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- Color - set a node color. There are 3 modes of node color: constant, variable and calculated.
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- Color - set a node color. There are 3 modes of node color: constant, variable and calculated.
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* `Constant` means that all nodes have the same color.
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- `Constant` means that all nodes have the same color.
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* `Variable` allows you to choose a field by which the color is determined.
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- `Variable` allows you to choose a field by which the color is determined.
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With this option you can also choose if the color value should be taken directly or mapped to a
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With this option you can also choose if the color value should be taken directly or mapped to a
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color palette.
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color palette.
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* `Direct` mode means that in the JSON document representing the node, the value in the selected
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- `Direct` mode means that in the JSON document representing the node, the value in the selected
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field is used as a color. The color value in the JSON document can be set in [different
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field is used as a color. The color value in the JSON document can be set in different
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ways][2]:
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ways:
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1. As Hex, 8-digit (RGBA) Hex:
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1. As Hex, 8-digit (RGBA) Hex:
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```
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```
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#000
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#000
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000
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000
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#f0f0f688
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#f0f0f688
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f0f0f688
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f0f0f688
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```
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```
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2. RGB, RGBA:
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2. RGB, RGBA:
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```
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```
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rgb (255, 0, 0)
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// As a string:
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rgb(255, 0, 0)
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rgb 255 0 0
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rgb 255 0 0
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rgba (255, 0, 0, .5)
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rgba(255, 0, 0, .5)
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// As a nested structure:
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{ "r": 255, "g": 0, "b": 0 }
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{ "r": 255, "g": 0, "b": 0 }
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```
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```
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3. HSL, HSLA:
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3. HSL, HSLA:
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```
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```
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// As a string:
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hsl(0, 100%, 50%)
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hsl(0, 100%, 50%)
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hsla(0, 100%, 50%, .5)
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hsla(0, 100%, 50%, .5)
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hsl(0, 100%, 50%)
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hsl(0, 100%, 50%)
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hsl 0 1.0 0.5
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hsl 0 1.0 0.5
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// As a nested structure:
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{ "h": 0, "s": 1, "l": .5 }
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{ "h": 0, "s": 1, "l": .5 }
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```
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```
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4. HSV, HSVA:
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4. HSV, HSVA:
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```
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```
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// As a string:
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hsv(0, 100%, 100%)
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hsv(0, 100%, 100%)
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hsva(0, 100%, 100%, .5)
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hsva(0, 100%, 100%, .5)
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hsv (0 100% 100%)
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hsv(0 100% 100%)
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hsv 0 1 1
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hsv 0 1 1
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// As a nested structure:
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{ "h": 0, "s": 100, "v": 100 }
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{ "h": 0, "s": 100, "v": 100 }
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```
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```
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5. Named colors:
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5. Named colors:
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Case insensitive names are accepted, using the list of [colors in the CSS
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Case insensitive names are accepted, using the list of [colors in the CSS
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spec][3].
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spec][2].
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```
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```
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RED
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RED
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blanchedalmond
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blanchedalmond
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darkblue
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darkblue
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```
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```
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When `Map to` option is selected, the value by the selected field can be anything because it
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When `Map to` option is selected, the value by the selected field can be anything because it
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won't be used directly as a color. In this case each distinct value will be mapped to a certain
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won't be used directly as a color. In this case each distinct value will be mapped to a certain
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color, so nodes with the same value will have the same color. Click on a color palette to open a
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color, so nodes with the same value will have the same color. Click on a color palette to open a
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palette selector.
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palette selector.
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`Calculated` color mode allows to choose a method that will be used to determine a color.
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`Calculated` color mode allows to choose a method that will be used to determine a color.
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Currently, 3 methods are available: total node degree, degree by in-edges and degree by
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Currently, 3 methods are available: total node degree, degree by in-edges and degree by
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out-edges. You can also choose a color palette that will be used in a mapping of calculated
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out-edges. You can also choose a color palette that will be used in a mapping of calculated
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values into an actual color.
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values into an actual color.
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- Color As - defines how color mapping should work - continuously or categorically.
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- Color As - defines how color mapping should work - continuously or categorically.
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Continuous mode is more suitable when the mapped values have a meaningful order. It looks more
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Continuous mode is more suitable when the mapped values have a meaningful order. It looks more
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informative with sequential palettes. In that case the lowest value corresponds to the first
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informative with sequential palettes. In that case the lowest value corresponds to the first
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color in the palette and the highest value - to the last color. The color of each intermediate
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color in the palette and the highest value - to the last color. The color of each intermediate
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value reflects the position of that value in the range.
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value reflects the position of that value in the range.
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Categorical mode just uses the next color in the palette for each new distinct value.
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Categorical mode just uses the next color in the palette for each new distinct value.
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- Colorscale Direction - use the selected palette as is or reverse it.
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- Colorscale Direction - use the selected palette as is or reverse it.
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### Edges
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### Edges
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- Label Color - a color of edge labels
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- Label Color - a color of edge labels
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- Size - set an edge thickness. There are 2 modes of edge sizing: constant and variable.
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- Size - set an edge thickness. There are 2 modes of edge sizing: constant and variable.
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* `Constant` means that all edges have the same thickness.
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- `Constant` means that all edges have the same thickness.
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* `Variable` allows you to choose a field where the edge size is taken from.
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- `Variable` allows you to choose a field where the edge size is taken from.
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For variable sizing it's also possible to set the scale and the minimum size.
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For variable sizing it's also possible to set the scale and the minimum size.
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- Color - set an edge color. There are 2 modes of edge color: constant and variable. They work
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- Color - set an edge color. There are 2 modes of edge color: constant and variable. They work
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similar to the node color modes.
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similar to the node color modes.
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- Color As - defines how color mapping should work - continuously or categorically, similar to the
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- Color As - defines how color mapping should work - continuously or categorically, similar to the
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node color setting.
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node color setting.
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- Colorscale Direction - use the selected palette as is or reverse it.
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- Colorscale Direction - use the selected palette as is or reverse it.
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### Layout
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### Layout
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#### Random
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#### Random
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This layout places nodes randomly for each seed value. The seed value allows you to restore the
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This layout places nodes randomly for each seed value. The seed value allows you to restore the
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random layout you liked when you open the inquiry and run the query next time.
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random layout you liked when you open the inquiry and run the query next time.
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#### Circle pack
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#### Circle pack
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Arranges nodes as a bubble chart according to specified attributes. You can choose multiple
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Arranges nodes as a bubble chart according to specified attributes. You can choose multiple
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hierarchy attributes to group nodes.
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hierarchy attributes to group nodes.
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#### ForceAtlas2
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#### ForceAtlas2
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A continuous graph layout algorithm. Read more details about the algorithm and its settings in the
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A continuous graph layout algorithm. Read more details about the algorithm and its settings in the
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[article][4]. The algorithm works iteratively. When you choose ForceAtlas2 layout or run the query,
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[article][3]. The algorithm works iteratively. When you choose ForceAtlas2 layout or run the query,
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it is automatically run 50 iterations of the algorithm. You can change the amount of steps run
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it is automatically run 50 iterations of the algorithm. You can change the amount of steps run
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automatically in `Initial Iterations`. You can also run and stop the algorithm manually by
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automatically in `Initial Iterations`. You can also run and stop the algorithm manually by
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clicking `Start`/`Stop` button.
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clicking `Start`/`Stop` button.
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[1]: ./How-to-get-result-set-suitable-for-graph-visualisation
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[1]: ./How-to-get-result-set-suitable-for-graph-visualisation
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[2]: https://github.com/bgrins/TinyColor/blob/d5ad0c6/README.md#accepted-string-input
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[2]: https://www.w3.org/TR/css-color-4/#named-colors
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[3]: https://www.w3.org/TR/css-color-4/#named-colors
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[3]: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0098679
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[4]: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0098679
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